Package: PSPclean 0.1.5.9002

Ian M S Eddy

PSPclean: Sources and standardizes permanent sample plot data

Converts all data into two keyed tables. One is for tree measurements, and the other is for plot data. Some arguments exist for handling disturbance agents.

Authors:Ian M S Eddy [aut, cre], Alex M Chubaty [ctb]

PSPclean_0.1.5.9002.tar.gz
PSPclean_0.1.5.9002.zip(r-4.5)PSPclean_0.1.5.9002.zip(r-4.4)PSPclean_0.1.5.9002.zip(r-4.3)
PSPclean_0.1.5.9002.tgz(r-4.4-any)PSPclean_0.1.5.9002.tgz(r-4.3-any)
PSPclean_0.1.5.9002.tar.gz(r-4.5-noble)PSPclean_0.1.5.9002.tar.gz(r-4.4-noble)
PSPclean_0.1.5.9002.tgz(r-4.4-emscripten)PSPclean_0.1.5.9002.tgz(r-4.3-emscripten)
PSPclean.pdf |PSPclean.html✨
PSPclean/json (API)

# Install 'PSPclean' in R:

install.packages('PSPclean', repos = c('https://predictiveecology.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ianmseddy/pspclean/issues

On CRAN:

20 exports 0.49 score 123 dependencies

Last updated 3 months agofrom:4c322b984c (on development). Checks:OK: 1 ERROR: 6. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Aug 20 2024
R-4.5-win	ERROR	Aug 20 2024
R-4.5-linux	ERROR	Aug 20 2024
R-4.4-win	ERROR	Aug 20 2024
R-4.4-mac	ERROR	Aug 20 2024
R-4.3-win	ERROR	Aug 20 2024
R-4.3-mac	ERROR	Aug 20 2024

Exports:dataPurification_ABPSP dataPurification_BCPSP dataPurification_NBPSP dataPurification_NFIPSP dataPurification_ONPSP dataPurification_QCPSP dataPurification_SKPSP dataPurification_SKTSP_Mistik geoCleanPSP getPSP prepInputsAlbertaPSP prepInputsBCPSP prepInputsNBPSP prepInputsNFIPSP prepInputsOntarioPSP prepInputsQCPSP prepInputsSaskatchwanPSP prepInputsSaskatchwanTSP prepPSP_climateNA standardizeSpeciesNames

Dependencies:abind amc askpass backports base64enc bit bit64 bitops boot broom car carData checkmate class classInt cli colorspace corrplot cowplot cpp11 crayon curl data.table DBI Deriv digest dismo doBy dplyr e1071 fansi farver fasterize filelock fpCompare fs generics ggplot2 ggpubr ggrepel ggsci ggsignif ggspatial glue gridExtra gtable hms httr insight isoband jpeg jsonlite KernSmooth labeling LandR lattice lifecycle lme4 lobstr magrittr MASS Matrix MatrixModels mgcv microbenchmark mime minqa modelr MuMIn munsell nlme nloptr nnet numDeriv openssl parallelly pbkrtest pemisc peutils pillar pkgconfig png polynom prettyunits progress proxy purrr quantreg quickPlot R6 raster RColorBrewer Rcpp RcppArmadillo RcppEigen RCurl reproducible Require rlang rosm rstatix s2 scales sf sp SpaDES.tools SparseM stringi stringr survival sys terra tibble tidyr tidyselect tidyterra units utf8 vctrs viridis viridisLite withr wk

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
standardize and treat the Alberta PSP data	dataPurification_ABPSP
standardize and treat the BC PSP data	dataPurification_BCPSP
standardize and treat the New Brunswick PSP data	dataPurification_NBPSP
standardize and treat the NFI PSP data	dataPurification_NFIPSP
standardize and treat the Ontario PSP data	dataPurification_ONPSP
standardize and treat the QUEBEC PSP data	dataPurification_QCPSP
standardize and treat the Saskatchewan PSP data	dataPurification_SKPSP
standardize and treat the Saskatchewan Mistik TSP data	dataPurification_SKTSP_Mistik
convert plot location data to long/lat and output in a sf object	geoCleanPSP
return a merged PSP object from a vector of data sources	getPSP
source the Alberta PSP data	prepInputsAlbertaPSP
Source the BC PSP data	prepInputsBCPSP
retrieve the New Brunswick PSP raw data	prepInputsNBPSP
source the NFI PSP data	prepInputsNFIPSP
retrieve preprocessed Ontario PSP and PGP data	prepInputsOntarioPSP
retrieve the Quebec PSP raw data	prepInputsQCPSP
source the Saskatchewan PSP data	prepInputsSaskatchwanPSP
source the Saskatchewan PSP data	prepInputsSaskatchwanTSP
standardize and treat the BC PSP data	prepPSP_climateNA
standardize the species names in a given PSP measurement data.table	standardizeSpeciesNames